DNA Binding Motif

						

			
Accessions: CDX2_DBD (HumanTF 1.0)

			
Names: CDX2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 9
Consensus: gymATAAAa
Weblogo: 
PSSM: P0      A      C      G      T
01    508    407   1186    102      g
02     83   1181     25   1022      y
03   1281    922     27    193      m
04   2203     13    217      2      A
05     27     23      7   2203      T
06   2203     23      3    154      A
07   2203      0     20    143      A
08   2203     47     51     85      A
09   1233    455    226    290      a
Binding TFs: CDX2_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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