DNA Binding Motif

						

			
Accessions: VSX1_6 (HT-SELEX2 May2017)

			
Names: VSX1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: cyAATTAm
Weblogo: 
PSSM: P0      A      C      G      T
01   1840  16438   3882   3559      c
02    890   4516    427  11922      y
03  16438    836    317    556      A
04  16438    250      0      0      A
05      0      0      0  16438      T
06      0   1000    597  16438      T
07  16438    204   1463   1186      A
08   4211   4552   4079   3596      m
Binding TFs: VSX1 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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