DNA Binding Motif

						

			
Accessions: M0722 (AthalianaCistrome v4_May2016)

			
Names: RAV1.DAP, T00471;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: mwgrTdwwtTyTGTTGb
Weblogo: 
PSSM: P0      A      C      G      T
01    202    274     92     22      m
02    275      0    110    205      w
03     98    105    286    101      g
04    287     25    195     83      r
05     70     42     73    405      T
06    227     18    191    154      d
07    228     45    110    207      w
08    157     34     30    369      w
09     99     94     11    386      t
10     81     22     19    468      T
11    112    277     24    177      y
12      0      8      0    582      T
13      0      0    590      0      G
14     11     27      5    547      T
15      8     11     32    539      T
16      9      8    508     65      G
17     73    159    161    197      b
Binding TFs: T00471 (AP2 domain, B3 DNA binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.