DNA Binding Motif

						

			
Accessions: RFX5_DBD_2 (HumanTF 1.0)

			
Names: RFX5
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 16
Consensus: sGTTrCCATrGCAACs
Weblogo: 
PSSM: P0      A      C      G      T
01    273   1034    814    471      s
02     83      2   2193     21      G
03     19     23     22   2199      T
04     67     88     17   2142      T
05   1022     81   1018    119      r
06      7   2022     40     65      C
07      2   1987     11    220      C
08   1901     33     54    109      A
09     89     36     18   2167      T
10    876      3   1246      0      r
11    121     40   2095      0      G
12    117   1880     57    353      C
13   1947      2     62     20      A
14   1964     24     10      4      A
15     15   2049      9     38      C
16    454    861    913    279      s
Binding TFs: RFX5_DBD (RFX DNA-binding domain, Poxvirus D5 protein-like)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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