DNA Binding Motif
| Accessions: | MA1817.1 (JASPAR 2024) |
| Names: | Zm00001d020267 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | ccGCCGCCGCCgc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1873 7440 3127 2361 c 02 1541 8346 2985 1929 c 03 453 711 13149 488 G 04 299 13416 683 403 C 05 271 13624 555 351 C 06 567 247 13656 331 G 07 308 13462 632 399 C 08 277 13749 446 329 C 09 458 233 13639 471 G 10 379 13257 657 508 C 11 354 13267 760 420 C 12 2204 3064 7641 1892 g 13 2006 6993 3317 2485 c |
| Type: | Heterodimer |
| Binding TFs: | A0A060D1F1 (AP2 domain) A0A060D1F1 |
| Binding Sites: | MA1817.1.1 / MA1817.1.2 MA1817.1.10 MA1817.1.11 MA1817.1.12 MA1817.1.13 / MA1817.1.14 / MA1817.1.15 MA1817.1.16 MA1817.1.17 MA1817.1.18 MA1817.1.19 MA1817.1.2 / MA1817.1.3 MA1817.1.20 MA1817.1.3 / MA1817.1.5 MA1817.1.11 / MA1817.1.4 MA1817.1.12 / MA1817.1.5 MA1817.1.13 / MA1817.1.6 MA1817.1.15 / MA1817.1.7 MA1817.1.17 / MA1817.1.8 MA1817.1.19 / MA1817.1.9 MA1817.1.1 MA1817.1.10 MA1817.1.14 MA1817.1.16 MA1817.1.18 MA1817.1.20 MA1817.1.4 MA1817.1.6 MA1817.1.7 MA1817.1.8 MA1817.1.9 |
| Publications: | Li S, Wang H, Li F, Chen Z, Li X, Zhu L, Wang G, Yu J, Huang D, Lang Z. The maize transcription factor EREB58 mediates the jasmonate-induced production of sesquiterpene volatiles. Plant J 84:296-308 (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.