DNA Binding Motif
| Accessions: | MA1643.1 (JASPAR 2024) |
| Names: | NFIB |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 21 |
| Consensus: | trcCTGGCAykgTGCCAagha |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1055 946 1023 1392 t 02 1181 839 1298 1098 r 03 424 2911 526 555 c 04 273 3142 193 808 C 05 133 20 162 4101 T 06 5 11 4389 11 G 07 16 12 4372 16 G 08 148 4223 27 18 C 09 3178 519 175 544 A 10 443 1190 608 2175 y 11 1087 792 1149 1388 k 12 594 532 2822 468 g 13 701 181 451 3083 T 14 14 31 4191 180 G 15 16 4357 23 20 C 16 8 4382 11 15 C 17 3937 373 36 70 A 18 2989 161 1055 211 a 19 552 467 2969 428 g 20 1156 1193 874 1193 h 21 1367 1015 984 1050 a |
| Type: | Heterodimer |
| Binding TFs: | O00712 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus) O00712 |
| Binding Sites: | MA1643.1.1 MA1643.1.10 / MA1643.1.4 MA1643.1.11 MA1643.1.12 MA1643.1.13 / MA1643.1.5 MA1643.1.14 MA1643.1.15 MA1643.1.16 / MA1643.1.6 MA1643.1.17 MA1643.1.18 / MA1643.1.7 MA1643.1.19 MA1643.1.1 / MA1643.1.2 MA1643.1.20 MA1643.1.3 MA1643.1.2 / MA1643.1.4 MA1643.1.5 MA1643.1.3 / MA1643.1.6 MA1643.1.7 MA1643.1.8 MA1643.1.9 MA1643.1.10 MA1643.1.11 MA1643.1.12 MA1643.1.13 MA1643.1.14 MA1643.1.15 MA1643.1.16 MA1643.1.17 MA1643.1.18 MA1643.1.19 MA1643.1.20 MA1643.1.8 MA1643.1.9 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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