DNA Binding Motif

						

			
Accessions: PB0102.1 (JASPAR 2024)

			
Names: Zic2_1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: universal protein binding microarray (PBM)
Length: 15
Consensus: bmCCCCCgGGGGggt
Weblogo: 
PSSM: P0      A      C      G      T
01     17     30     28     25      b
02     27     49      9     14      m
03     14     72      3     11      C
04     12     77      5      6      C
05     10     84      3      3      C
06      6     81      7      6      C
07      6     77     16      2      C
08      7     11     63     19      g
09      6      7     81      6      G
10      3      3     84     10      G
11      6      5     77     12      G
12     11      3     72     14      G
13     12      7     61     20      g
14      7     22     56     16      g
15     18     20     21     42      t
Type: Heterodimer
Binding TFs: Q62520 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q62520
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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