DNA Binding Motif
| Accessions: | MA1813.2 (JASPAR 2024) |
| Names: | EIL4 |
| Organisms: | Solanum lycopersicum |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 9 |
| Consensus: | twCAATGAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 85 38 51 307 t 02 211 29 68 173 w 03 0 481 0 0 C 04 415 0 26 40 A 05 439 11 11 20 A 06 21 25 4 431 T 07 1 0 478 2 G 08 389 6 6 80 A 09 466 8 0 7 A |
| Type: | Heterodimer |
| Binding TFs: | Q76DI3 (Ethylene insensitive 3) Q76DI3 |
| Binding Sites: | MA1813.2.1 MA1813.2.10 MA1813.2.11 / MA1813.2.12 MA1813.2.13 MA1813.2.14 / MA1813.2.18 / MA1813.2.20 / MA1813.2.4 / MA1813.2.6 / MA1813.2.7 MA1813.2.15 MA1813.2.16 MA1813.2.17 MA1813.2.19 MA1813.2.2 MA1813.2.3 MA1813.2.5 MA1813.2.8 MA1813.2.9 |
| Publications: | Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3. J Mol Biol 348:253-64 (2005). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.