DNA Binding Motif

						

			
Accessions: BHLHE22_methyl_1 (HT-SELEX2 May2017)

			
Names: BHLHE22
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: AmCATATGky
Weblogo: 
PSSM: P0      A      C      G      T
01   7062    658    595    758      A
02   2498   2757   1682    125      m
03     98   7062      0      0      C
04   7062     33    413    250      A
05      0     80     56   7062      T
06   7062      8     71      0      A
07    104    328     38   7062      T
08     13     21   7062    171      G
09    114   1576   2919   2452      k
10    416   2836    316   4226      y
Binding TFs: BHLHE22 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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