DNA Binding Motif

						

			
Accessions: HOXA1_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXA1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: sTaATtAs
Weblogo: 
PSSM: P0      A      C      G      T
01   1150   2126   2336   1155      s
02      0   1644      0   6767      T
03   6767   2565   1679    117      a
04   6767      0      0      0      A
05      0      0     91   6767      T
06     45   1477   2449   6767      t
07   6767      0   1877     74      A
08   1332   2322   2013   1100      s
Binding TFs: HOXA1 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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