DNA Binding Motif

						

			
Accessions: UN0374.1 (JASPAR 2024), MA2047.1 (JASPAR 2024)

			
Names: NAC037
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: haCAAGCAAyc
Weblogo: 
PSSM: P0      A      C      G      T
01    543    530    269    645      h
02    690    347    462    488      a
03     25   1779     32    151      C
04   1919     22     17     29      A
05   1709    217     14     47      A
06      6     24   1928     29      G
07      4   1727     32    224      C
08   1725     85     56    121      A
09   1827     16     24    120      A
10    450    601    330    606      y
11    496    643    438    410      c
Type: Heterodimer
Binding TFs: Q9SL41 (No apical meristem (NAM) protein)
Q9SL41
Binding Sites: MA2047.1.3 / UN0374.1.3
MA2047.1.10 / UN0374.1.10
UN0374.1.11
UN0374.1.12
MA2047.1.11 / UN0374.1.13
MA2047.1.12 / UN0374.1.14
MA2047.1.14 / UN0374.1.15
MA2047.1.6 / UN0374.1.6
MA2047.1.7 / UN0374.1.7
MA2047.1.8 / UN0374.1.8
MA2047.1.9 / UN0374.1.9
MA2047.1.1 / UN0374.1.1
MA2047.1.19
MA2047.1.15 / UN0374.1.16
UN0374.1.17
MA2047.1.16 / UN0374.1.18
MA2047.1.17 / UN0374.1.19
MA2047.1.2 / UN0374.1.2
MA2047.1.18 / UN0374.1.20
MA2047.1.4 / UN0374.1.4
MA2047.1.5 / UN0374.1.5
MA2047.1.13
MA2047.1.20
			
Publications: Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.