DNA Binding Motif
| Accessions: | MA1597.1 (JASPAR 2024) |
| Names: | ZNF528 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 17 |
| Consensus: | cccAGGGAAGcCATTtC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 84 380 66 86 c 02 69 367 87 93 c 03 100 404 64 48 c 04 524 12 61 19 A 05 32 3 573 8 G 06 7 5 598 6 G 07 22 2 590 2 G 08 608 3 3 2 A 09 579 4 26 7 A 10 5 1 608 2 G 11 35 414 54 113 c 12 15 590 3 8 C 13 606 2 7 1 A 14 11 47 11 547 T 15 1 97 14 504 T 16 11 129 62 414 t 17 16 558 8 34 C |
| Type: | Heterodimer |
| Binding TFs: | Q3MIS6 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q3MIS6 |
| Binding Sites: | MA1597.1.1 MA1597.1.10 / MA1597.1.9 MA1597.1.10 / MA1597.1.11 MA1597.1.11 / MA1597.1.12 MA1597.1.12 / MA1597.1.13 MA1597.1.13 / MA1597.1.14 MA1597.1.14 / MA1597.1.15 MA1597.1.16 MA1597.1.17 MA1597.1.18 MA1597.1.19 MA1597.1.1 / MA1597.1.2 MA1597.1.20 MA1597.1.2 / MA1597.1.3 MA1597.1.3 / MA1597.1.4 MA1597.1.4 / MA1597.1.5 MA1597.1.5 / MA1597.1.6 MA1597.1.6 / MA1597.1.7 MA1597.1.7 / MA1597.1.8 MA1597.1.8 / MA1597.1.9 MA1597.1.15 MA1597.1.20 |
| Publications: | Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.