DNA Binding Motif

						

			
Accessions: UN0592.1 (JASPAR 2024)

			
Names: ZKSCAN8
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 24
Consensus: ctkGyAyACAGTAGGyGCTCAATA
Weblogo: 
PSSM: P0      A      C      G      T
01    109    523    114    230      c
02    169    212    134    461      t
03    167     38    523    248      k
04     36      6    916     18      G
05     28    528     14    406      y
06    954      4      9      9      A
07     57    283     15    621      y
08    822     22     99     33      A
09      4    928      4     40      C
10    944     12      3     17      A
11     52     21    892     11      G
12     31    218     29    698      T
13    812     44     38     82      A
14    126      5    839      6      G
15     27      4    931     14      G
16     46    267     13    650      y
17    173      7    791      5      G
18      9    889      9     69      C
19     46     96      4    830      T
20     57    684     28    207      C
21    851     67     29     29      A
22    762     47    112     55      A
23     46     54     35    841      T
24    736     65     99     76      A
Type: Heterodimer
Binding TFs: Q15776 (Zinc finger, C2H2 type, KRAB box, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q15776
Binding Sites: UN0592.1.1 / UN0592.1.2
UN0592.1.10 / UN0592.1.12
UN0592.1.11 / UN0592.1.13
UN0592.1.12 / UN0592.1.14
UN0592.1.13 / UN0592.1.15
UN0592.1.14 / UN0592.1.16
UN0592.1.15 / UN0592.1.17
UN0592.1.16 / UN0592.1.18
UN0592.1.17 / UN0592.1.19
UN0592.1.18 / UN0592.1.20
UN0592.1.19
UN0592.1.2 / UN0592.1.4
UN0592.1.20
UN0592.1.3 / UN0592.1.5
UN0592.1.4 / UN0592.1.6
UN0592.1.5 / UN0592.1.7
UN0592.1.6 / UN0592.1.8
UN0592.1.7 / UN0592.1.9
UN0592.1.10 / UN0592.1.8
UN0592.1.11 / UN0592.1.9
UN0592.1.1
UN0592.1.3
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.