DNA Binding Motif

						

			
Accessions: sob_SOLEXA_5_FBgn0004892 (FlyZincFinger 1.0 )

			
Names: CG3242
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 14
Consensus: bkGCTACyGkkykk
Weblogo: 
PSSM: P0      A      C      G      T
01     46    230    195    225      b
02    157     77    262    251      k
03     59     10    666     28      G
04     13    750      0      0      C
05     19     20      1    723      T
06    610     14     10    129      A
07     64    699      0      0      C
08     83    268      0    412      y
09     48      1    670     44      G
10     34     42    282    405      k
11    146     55    273    289      k
12     86    239    141    297      y
13    158     98    226    281      k
14    162    129    191    268      k
Binding TFs: sob (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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