DNA Binding Motif
| Accessions: | MA1833.2 (JASPAR 2024) |
| Names: | Zm00001d049364 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | CcGCCGCCGCC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1345 13507 2196 1558 C 02 3673 9771 2975 2187 c 03 711 1027 16187 681 G 04 352 17229 601 424 C 05 464 17025 607 510 C 06 652 366 17063 525 G 07 300 17272 593 441 C 08 465 17013 612 516 C 09 605 321 17121 559 G 10 416 16869 777 544 C 11 461 16513 1008 624 C |
| Type: | Heterodimer |
| Binding TFs: | B6TYT8 (AP2 domain) B6TYT8 |
| Binding Sites: | MA1833.2.11 / MA1833.2.12 / MA1833.2.13 / MA1833.2.14 / MA1833.2.3 / MA1833.2.4 MA1833.2.19 MA1833.2.17 / MA1833.2.20 MA1833.2.1 MA1833.2.10 MA1833.2.15 MA1833.2.16 MA1833.2.18 MA1833.2.2 MA1833.2.5 MA1833.2.6 MA1833.2.7 MA1833.2.8 MA1833.2.9 |
| Publications: | Buettner M., Singh K. B. Arabidopsis thaliana ethylene-responsive element binding protein (AtEBP), an ethylene-inducible, GCC box DNA-binding protein interacts with an ocs element binding protein. Proc. Natl. Acad. Sci. USA 94:5961-5966 (1997). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.