DNA Binding Motif

						

			
Accessions: ZIC3_methyl_1 (HT-SELEX2 May2017)

			
Names: ZIC3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: mgACCCCCTGCTGTGm
Weblogo: 
PSSM: P0      A      C      G      T
01    745    606    591    434      m
02     32    344   1849    497      g
03   2059    249    340      1      A
04     21   2376      0      2      C
05      9   2373      3      1      C
06     21   2358      2      7      C
07      2   2376      0      0      C
08      6   2371      3      0      C
09      0    506      1   2105      T
10     38      0   2376      0      G
11      1   2374      0      0      C
12     12     50     84   2310      T
13      4      0   2374      4      G
14     83     23     20   2335      T
15      0      0   2360     41      G
16   1088   1227     10    109      m
Binding TFs: ZIC3 (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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