DNA Binding Motif

						

			
Accessions: M0667 (AthalianaCistrome v4_May2016)

			
Names: ANAC038.DAP, T09752;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: TwrCkTGtdkwacAmGww
Weblogo: 
PSSM: P0      A      C      G      T
01     48      3      3    546      T
02    217      4     85    294      w
03    337     12    180     71      r
04     23    574      3      0      C
05      1      0    358    241      k
06      0      0      0    600      T
07     81     27    492      0      G
08     92     99     24    385      t
09    175     66    189    170      d
10    143     90    200    167      k
11    162    145    136    157      w
12    342     36     92    130      a
13     28    388     73    111      c
14    545      2     13     40      A
15    343    216     35      6      m
16     25      1    552     22      G
17    170    111     77    242      w
18    292    107     16    185      w
Binding TFs: T09752 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.