DNA Binding Motif

						

			
Accessions: GABPA_2 (HT-SELEX2 May2017)

			
Names: GABPA
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: rrCCGGAAGyr
Weblogo: 
PSSM: P0      A      C      G      T
01   3468   3310   3780   2988      r
02  13546   1328   7658   2097      r
03   1989  13546   3549     63      C
04   1298  13546     28      0      C
05      0     11  13546      0      G
06     27      0  13546    144      G
07  13546      0      0      0      A
08  13546    232      0   3970      A
09   4524    255  13546      0      G
10   1082   6255   2678  13546      y
11   3521   2707   4817   2501      r
Binding TFs: GABPA (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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