DNA Binding Motif

						

			
Accessions: M0636 (AthalianaCistrome v4_May2016)

			
Names: ANAC058.DAP, T14138;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CkTGtrmmaCAmGywA
Weblogo: 
PSSM: P0      A      C      G      T
01      3    588      0      0      C
02      0      1    226    364      k
03      0      0      0    591      T
04     80     44    457     10      G
05    117     87     39    348      t
06    156    118    181    136      r
07    172    213     80    126      m
08    191    165     90    145      m
09    355     22    129     85      a
10      5    458     39     89      C
11    591      0      0      0      A
12    270    321      0      0      m
13      0      0    570     21      G
14     74    162     26    329      y
15    277     81      4    229      w
16    523      4      7     57      A
Binding TFs: T14138 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.