DNA Binding Motif

						

			
Accessions: ALX4_DBD (HumanTF 1.0)

			
Names: ALX4
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 13
Consensus: mTAATyhaATTAm
Weblogo: 
PSSM: P0      A      C      G      T
01   2884   3856   1552   2482      m
02   2186   1284    275  10774      T
03  10774    234    977    999      A
04  10774     42     50     18      A
05    963   3311    420  10774      T
06    657   4822   1299   5952      y
07   3186   2891   1855   2842      h
08   8139   1760   2636    518      a
09  10774    628   1038    414      A
10     38    123     22  10774      T
11   1832   1816    225  10774      T
12  10774    317    547   1131      A
13   3400   3169   2105   2101      m
Binding TFs: ALX4_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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