DNA Binding Motif

						

			
Accessions: Otx1_DBD_2 (HumanTF 1.0)

			
Names: Otx1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 8
Consensus: wTAATCCk
Weblogo: 
PSSM: P0      A      C      G      T
01   1260   1057    584   1626      w
02    213    201      0   4527      T
03   4527    259    344    195      A
04   4527      5     35      0      A
05      0    154    595   4527      T
06    292   4527    212    121      C
07    158   4527    493   1193      C
08    614   1015   1604   1294      k
Binding TFs: Otx1_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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