DNA Binding Motif

						

			
Accessions: MAX_2 (HT-SELEX2 May2017)

			
Names: MAX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: sCACGTGsysrsCACGTGs
Weblogo: 
PSSM: P0      A      C      G      T
01   2929   3625   3665   2144      s
02    544  12363      0      0      C
03  12363      0   1894    147      A
04      1  12363      0    961      C
05    881      0  12363      2      G
06    110   1630      0  12363      T
07      0      0  12363    399      G
08   2253   3691   3707   2712      s
09   2409   3767   2996   3191      y
10   2990   3226   3240   2907      s
11   3131   2964   3811   2457      r
12   2755   3634   3644   2329      s
13    301  12363      7      0      C
14  12363      0   1543    104      A
15      6  12363      0    859      C
16   1019      3  12363      0      G
17    131   2050      5  12363      T
18      0      0  12363    496      G
19   2190   3801   3439   2933      s
Binding TFs: MAX (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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