DNA Binding Motif
| Accessions: | MA1267.2 (JASPAR 2024) |
| Names: | DOF5.8 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 19 |
| Consensus: | ttttttytTTTtaCTTTTt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 91 132 49 325 t 02 105 142 42 308 t 03 84 104 41 368 t 04 102 114 33 348 t 05 146 119 37 295 t 06 134 149 62 252 t 07 107 184 32 274 y 08 64 139 26 368 t 09 89 39 32 437 T 10 72 44 35 446 T 11 20 116 25 436 T 12 113 105 27 352 t 13 290 79 107 121 a 14 1 585 10 1 C 15 1 21 1 574 T 16 0 0 0 597 T 17 0 1 0 596 T 18 105 22 1 469 T 19 57 78 86 376 t |
| Type: | Heterodimer |
| Binding TFs: | Q9FGD6 (Dof domain, zinc finger) Q9FGD6 |
| Binding Sites: | MA1267.2.1 MA1267.2.10 MA1267.2.11 MA1267.2.12 MA1267.2.13 MA1267.2.14 MA1267.2.15 MA1267.2.16 MA1267.2.17 MA1267.2.18 MA1267.2.19 MA1267.2.2 MA1267.2.20 MA1267.2.3 MA1267.2.4 MA1267.2.5 MA1267.2.6 MA1267.2.7 MA1267.2.8 MA1267.2.9 |
| Publications: | Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.