DNA Binding Motif

						

			
Accessions: NPAS2_2 (HT-SELEX2 May2017)

			
Names: NPAS2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rmCACGTGyh
Weblogo: 
PSSM: P0      A      C      G      T
01   5204   1077   9843   3719      r
02  10922   8920   1189      0      m
03      0  19842      0      0      C
04  19842      0      0      0      A
05      0  19842      0      0      C
06      0      0  19842      0      G
07      0      0      0  19842      T
08      0      0  19842      0      G
09     29   8840   1767  11002      y
10   5550   5382   3754   5156      h
Binding TFs: NPAS2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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