DNA Binding Motif
| Accessions: | MA1828.1 (JASPAR 2024) |
| Names: | Zm00001d038683 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | ssGTGGTCCass |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 359 604 490 343 s 02 350 540 521 385 s 03 135 197 1406 58 G 04 17 65 50 1664 T 05 12 42 1727 15 G 06 10 9 1768 9 G 07 138 85 111 1462 T 08 9 1755 28 4 C 09 24 1746 18 8 C 10 1121 265 189 221 a 11 305 569 550 372 s 12 295 492 654 355 s |
| Type: | Heterodimer |
| Binding TFs: | C0HEC8 (TCP family transcription factor) C0HEC8 |
| Binding Sites: | MA1828.1.1 MA1828.1.10 MA1828.1.11 MA1828.1.11 / MA1828.1.12 MA1828.1.12 / MA1828.1.13 MA1828.1.14 MA1828.1.15 / MA1828.1.16 MA1828.1.16 MA1828.1.17 MA1828.1.18 MA1828.1.19 / MA1828.1.20 MA1828.1.1 / MA1828.1.2 MA1828.1.20 MA1828.1.3 / MA1828.1.4 MA1828.1.4 / MA1828.1.5 MA1828.1.5 / MA1828.1.6 MA1828.1.6 MA1828.1.7 MA1828.1.8 MA1828.1.9 MA1828.1.13 MA1828.1.15 MA1828.1.19 MA1828.1.2 MA1828.1.3 |
| Publications: | Schommer C, Palatnik JF, Aggarwal P, Chételat A, Cubas P, Farmer EE, Nath U, Weigel D. Control of jasmonate biosynthesis and senescence by miR319 targets. PLoS Biol : (2008). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.