DNA Binding Motif

						

			
Accessions: MA0351.2 (JASPAR 2024)

			
Names: DOT6
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: wsCTCATCGc
Weblogo: 
PSSM: P0      A      C      G      T
01    516     59    138    285      w
02     79    420    392    107      s
03     29    770    197      3      C
04      6     52     83    858      T
05      1    990      4      2      C
06    972      0      1     25      A
07      1      0     27    969      T
08      0    968      1     28      C
09     36      9    876     78      G
10    223    575    177     22      c
Type: Heterodimer
Binding TFs: P40059 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
P40059
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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