DNA Binding Motif
| Accessions: | 1gcc_A (3D-footprint 20231221) |
| Names: | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE |
| Length: | 9 |
| Consensus: | TGGCGGCTA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 8 8 8 72 T 02 0 0 96 0 G 03 8 8 72 8 G 04 0 96 0 0 C 05 0 0 96 0 G 06 0 0 96 0 G 07 0 96 0 0 C 08 8 0 8 80 T 09 72 8 8 8 A |
| Binding TFs: | 1gcc_A (AP2 domain) |
| Binding Sites: | 1gcc_B 1gcc_C |
| Publications: | Allen M.D, Yamasaki K, Ohme-Takagi M, Tateno M, Suzuki M. A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. The EMBO journal 17:5484-96 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.