DNA Binding Motif

						

			
Accessions: HOXA10_3 (HT-SELEX2 May2017)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: rGTCGTAAAAh
Weblogo: 
PSSM: P0      A      C      G      T
01   2822   1361   5642   1233      r
02   3534    918  11057      0      G
03      0     43      0  11057      T
04      0  11057      0      0      C
05   3314      0  11057      0      G
06      0      1      0  11057      T
07  11057      0      0   1198      A
08  11057      0      2      0      A
09  11057      0      0     56      A
10  11057   1543    754   2142      A
11   3045   3532   1263   3217      h
Binding TFs: HOXA10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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