DNA Binding Motif

						

			
Accessions: MA1087.2 (JASPAR 2024)

			
Names: WRKY45
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 15
Consensus: waaAAAGTCAAmrww
Weblogo: 
PSSM: P0      A      C      G      T
01    739    377    475    603      w
02    878    445    339    532      a
03   1345    339    218    292      a
04   1914     75     85    120      A
05   1960     34     51    149      A
06   2087     16     59     32      A
07     16      3   2159     16      G
08      4      5      7   2178      T
09     12   2166      6     10      C
10   2160     16      2     16      A
11   2155      8     15     16      A
12    721   1211     56    206      m
13    586    297    936    375      r
14    708    485    424    577      w
15    684    451    314    745      w
Type: Heterodimer
Binding TFs: Q9S763 (WRKY DNA -binding domain)
Q9S763
Binding Sites: MA1087.2.1
MA1087.2.10
MA1087.2.11
MA1087.2.12
MA1087.2.13
MA1087.2.14
MA1087.2.15
MA1087.2.16
MA1087.2.17
MA1087.2.18
MA1087.2.19
MA1087.2.2
MA1087.2.20
MA1087.2.3
MA1087.2.4
MA1087.2.5
MA1087.2.6
MA1087.2.7
MA1087.2.8
MA1087.2.9
			
Publications:  Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.