DNA Binding Motif
| Accessions: | usp (DrosophilaTF 1.1) |
| Names: | usp |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] |
| Length: | 9 |
| Consensus: | GGGGTCACg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.03 0.03 0.94 0 G 02 0.05 0 0.95 0 G 03 0 0 1 0 G 04 0 0 1 0 G 05 0 0 0 1 T 06 0 0.94 0.03 0.03 C 07 0.95 0 0.05 0 A 08 0.11 0.68 0.05 0.16 C 09 0.13 0.24 0.55 0.08 g |
| Binding TFs: | usp (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains)) |
| Binding Sites: | usp_1 usp_10 usp_11 usp_12 usp_13 usp_14 usp_15 usp_16 usp_17 usp_18 usp_19 usp_2 usp_20 usp_21 usp_22 usp_23 usp_24 usp_25 usp_26 usp_27 usp_28 usp_29 usp_3 usp_30 usp_31 usp_32 usp_33 usp_34 usp_35 usp_36 usp_37 usp_38 usp_4 usp_5 usp_6 usp_7 usp_8 usp_9 |
| Publications: | Christianson A. M. K., King D. L., Hatzivassiliou E., Casas J. E., Hallenbeck P. L., Nikodem V. M., Mitsialis S. A., Kafatos F. C. DNA binding and heteromerization of the Drosophila transcription factor chorion factor 1/ultraspiracle. Proc. Natl. Acad. Sci. USA 89:11503-11507 (1992). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.