DNA Binding Motif

						

			
Accessions: 1ku7_A (3D-footprint 20231221)

			
Names: sigma factor sigA
Organisms: Thermus aquaticus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNA
Length: 7
Consensus: CTTGACA
Weblogo: 
PSSM: P0      A      C      G      T
01      7     73      7      9      C
02      0      0      0     96      T
03      9      7      7     73      T
04      0      0     96      0      G
05     73      7      7      9      A
06      0     96      0      0      C
07     73      7      7      9      A
Binding TFs: 1ku7_A (Sigma-70, region 4)
Binding Sites: 1ku7_B
1ku7_C
			
Publications: Campbell E.A, Muzzin O, Chlenov M, Sun J.L, Olson C.A, Weinman O, Trester-Zedlitz M.L, Darst S.A. Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Molecular cell 9:527-39 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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