DNA Binding Motif

Accessions: MA1560.2 (JASPAR 2024)
Names: SOHLH2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 8
Consensus: gCACGTGc
Weblogo:
PSSM: P0 A C G T
01 172 264 1212 276 g
02 45 1212 29 70 C
03 1212 0 41 0 A
04 0 1212 11 7 C
05 14 0 1212 15 G
06 36 65 0 1212 T
07 41 4 1212 4 G
08 272 1212 172 153 c
Type: Heterodimer
Binding TFs: Q9NX45 (Helix-loop-helix DNA-binding domain)
Q9NX45
Publications: Park M, Lee Y, Jang H, Lee OH, Park SW, Kim JH, Hong K, Song H, Park SP, Park YY, Ko JJ, Choi Y. SOHLH2 is essential for synaptonemal complex formation during spermatogenesis in early postnatal mouse testes. Sci Rep : (2016). [Pubmed]

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