DNA Binding Motif

						

			
Accessions: TGIF2LX_methyl_3 (HT-SELEX2 May2017)

			
Names: TGIF2LX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TGACAgcTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    621   2460    252  13302      T
02    107    298  13302    120      G
03  13302     54    193    867      A
04     55  13302     36    110      C
05  13302     10    610     46      A
06     75   2477   8687   2062      g
07   2118   8584   2517     82      c
08     58    605      5  13302      T
09     95     41  13302     47      G
10    824    223     77  13302      T
11     92  13302    318    119      C
12  13302    226   2494    578      A
Binding TFs: TGIF2LX (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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