DNA Binding Motif
| Accessions: | 6p0t_B (3D-footprint 20231221) |
| Names: | DNA-binding protein Fis |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of ternary DNA complex "FX(1-2)-1Xis" containing E. coli Fis and phage lambda Xis |
| Length: | 6 |
| Consensus: | TgTntT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 13 13 57 13 g 03 0 0 0 96 T 04 24 24 24 24 n 05 13 13 16 54 t 06 0 0 0 96 T |
| Binding TFs: | 6p0t_B (Bacterial regulatory protein, Fis family) |
| Binding Sites: | 6p0t_C 6p0t_D |
| Publications: | Hancock SP, Cascio D, Johnson RC. Cooperative DNA binding by proteins through DNA shape complementarity. Nucleic Acids Res 47:8874-8887 (2019). [Pubmed] |
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