DNA Binding Motif
| Accessions: | MA0093.2 (JASPAR 2024) |
| Names: | USF1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | ryCAyGTGACc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4846 3764 7162 1070 r 02 1472 7448 2983 4939 y 03 43 16799 0 0 C 04 16573 0 0 269 A 05 188 10279 932 5443 y 06 1605 595 14642 0 G 07 0 0 0 16842 T 08 0 0 16842 0 G 09 14762 0 1375 705 A 10 0 13166 0 3676 C 11 1821 9926 1113 3982 c |
| Type: | Heterodimer |
| Binding TFs: | P22415 (Helix-loop-helix DNA-binding domain) P22415 |
| Binding Sites: | MA0093.2.1 MA0093.2.10 MA0093.2.11 MA0093.2.12 MA0093.2.13 MA0093.2.14 MA0093.2.15 MA0093.2.16 MA0093.2.17 MA0093.2.18 MA0093.2.19 MA0093.2.2 MA0093.2.20 MA0093.2.3 MA0093.2.4 MA0093.2.5 MA0093.2.6 MA0093.2.7 MA0093.2.8 MA0093.2.9 |
| Publications: | Bendall A. J., Molloy P. L. Base preference for DNA binding by the bHLH-Zip protein USF: effects of magnesiumchloride on specificity and comparison with binding of Myc family members. Nucleic Acids Res. 22:2801-2810 (1994). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.