DNA Binding Motif

						

			
Accessions: MA0644.2 (JASPAR 2024)

			
Names: ESX1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: CAP-SELEX
Length: 8
Consensus: yyAATTAv
Weblogo: 
PSSM: P0      A      C      G      T
01   1070  11980   2110   7690      y
02    589   7595      0  12075      y
03  19670    634    821    181      A
04  19670     95      0      0      A
05      0      0      0  19670      T
06     47   1009    225  19670      T
07  19670      0    925    557      A
08   5004   4935   6366   3365      v
Type: Heterodimer
Binding TFs: Q8N693 (Homeobox domain)
Q8N693
			
Publications: Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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