DNA Binding Motif

						

			
Accessions: M0154 (AthalianaCistrome v4_May2016)

			
Names: BAM8.DAP, T22029;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: yCACACGTGysaamt
Weblogo: 
PSSM: P0      A      C      G      T
01     34    206      5    355      y
02     19    499     42     40      C
03    417     37    139      7      A
04      0    599      0      1      C
05    599      0      1      0      A
06      2    598      0      0      C
07      0      0    600      0      G
08      0     10      0    590      T
09     13      0    585      2      G
10     29    244     12    315      y
11     84    241    248     27      s
12    295     73     93    139      a
13    269     99    123    109      a
14    167    195    100    138      m
15     97    130    111    262      t
Binding TFs: T22029 (Glycosyl hydrolase family 14, Plant protein of unknown function (DUF822))
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.