DNA Binding Motif

						

			
Accessions: HOXA13_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gCTCGTAAAah
Weblogo: 
PSSM: P0      A      C      G      T
01   4101   5759   9415   4098      g
02   3289  23372   4088      6      C
03    418    339    214  23372      T
04     36  23372     11    298      C
05    711      0  23372      1      G
06      0    388    131  23372      T
07  23372      0     41   2322      A
08  23372      0      0     96      A
09  23372    165      0    119      A
10  23372   6532   2288   7809      a
11   6144   7979   2935   6315      h
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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