DNA Binding Motif

						

			
Accessions: POU6F1_methyl_1 (HT-SELEX2 May2017)

			
Names: POU6F1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: rTAATGAkATGCrk
Weblogo: 
PSSM: P0      A      C      G      T
01   1253    871   1166   1069      r
02    174     70      0   4359      T
03   4359     28     95     57      A
04   4359      0      0      1      A
05      0     40      8   4359      T
06    115    172   4359    714      G
07   4359     60    142    167      A
08      0    117   1858   2501      k
09   4359     46    102     68      A
10     17     17      0   4359      T
11    175     34   4359    148      G
12    179   4359    295   1079      C
13   2042    248   2317    523      r
14    965    974   1130   1290      k
Binding TFs: POU6F1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.