DNA Binding Motif

						

			
Accessions: LEF1_4 (HT-SELEX2 May2017)

			
Names: LEF1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: AsATCAAAG
Weblogo: 
PSSM: P0      A      C      G      T
01   4313    289    722    464      A
02      0   1989   2323     49      s
03   4313      0      0    635      A
04      0      0      0   4313      T
05      3   4313    377      0      C
06   4313      0      0      2      A
07   4313     30     67     69      A
08   4313     26     60    288      A
09    252    682   3631     35      G
Binding TFs: LEF1 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.