DNA Binding Motif
| Accessions: | MA1213.2 (JASPAR 2024) |
| Names: | ZHD3 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | wwCAATTATTGdw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2877 1041 1101 2478 w 02 2259 1751 784 2703 w 03 705 5659 189 944 C 04 7125 133 26 213 A 05 7415 23 5 54 A 06 31 19 8 7439 T 07 1160 247 247 5843 T 08 7442 7 14 34 A 09 39 11 29 7418 T 10 129 30 67 7271 T 11 897 148 5524 928 G 12 2341 824 1964 2368 d 13 2244 1209 943 3101 w |
| Type: | Heterodimer |
| Binding TFs: | O64722 (ZF-HD protein dimerisation region) O64722 |
| Binding Sites: | MA1213.2.2 MA1213.2.3 MA1213.2.10 MA1213.2.11 MA1213.2.17 MA1213.2.18 MA1213.2.1 MA1213.2.12 MA1213.2.13 MA1213.2.14 MA1213.2.15 MA1213.2.16 MA1213.2.19 MA1213.2.20 MA1213.2.4 MA1213.2.5 MA1213.2.6 MA1213.2.7 MA1213.2.8 MA1213.2.9 |
| Publications: | Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.