DNA Binding Motif

						

			
Accessions: ZNF771_2 (HT-SELEX2 May2017), UN0226.1 (JASPAR 2024)

			
Names: ZNF771
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: drCGCTAACCAYTry
Weblogo: 
PSSM: P0      A      C      G      T
01  14577   8098  13847  15452      d
02  17714    348  31482   5221      r
03    471  51560    543    622      C
04   4170   1669  47381   3607      G
05    827  51450     26     66      C
06    221    647     29  51549      T
07  49792    223   4244     50      A
08  50933   2142    215     69      A
09      2  51958     65     58      C
10      6  51942      0     33      C
11  51629    223    698     28      A
12    278  16523    217  43966      Y
13    106   1730     26  51364      T
14  17882   6670  25757   9686      r
15  10430  14457  11789  15298      y
Type: Heterodimer
Binding TFs: ZNF771 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q7L3S4 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q7L3S4
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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