DNA Binding Motif

						

			
Accessions: SPIB_4 (HT-SELEX2 May2017)

			
Names: SPIB
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: rawwgmGGAAGTr
Weblogo: 
PSSM: P0      A      C      G      T
01   6722   2412   5592   3081      r
02  12315    940   3026   5379      a
03   8461    120    205   3853      w
04   6596    552   1199   5718      w
05   3645   2720  12315    536      g
06   5254   7061   3784    328      m
07   1163      0  12315      6      G
08      3      0  12315     27      G
09  12315      0      0     21      A
10  12315      0      0    171      A
11   1182   3745  12315     81      G
12   1325   3100    919  12315      T
13   3860   1915   3769   2771      r
Binding TFs: SPIB (Ets-domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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