DNA Binding Motif

						

			
Accessions: MA1435.1 (JASPAR 2024)

			
Names: nit-4
Organisms: Neurospora crassa
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: yTCCGCGGrg
Weblogo: 
PSSM: P0      A      C      G      T
01    210    310    204    274      y
02     11     70     11    906      T
03      0    999      0      0      C
04      0    884      0    115      C
05      0    115    884      0      G
06      0    999      0      0      C
07      0      0    999      0      G
08      0      0    999      0      G
09    388    181    320    110      r
10    238    238    285    238      g
Type: Heterodimer
Binding TFs: P28349 (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain )
P28349
			
Publications: Fu YH, Feng B, Evans S, Marzluf GA. Sequence-specific DNA binding by NIT4, the pathway-specific regulatory protein that mediates nitrate induction in Neurospora. Mol Microbiol 15:935-42 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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