DNA Binding Motif

						

			
Accessions: GCM1_DBD (HumanTF 1.0)

			
Names: GCM1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 10
Consensus: yATGCGGGTa
Weblogo: 
PSSM: P0      A      C      G      T
01    322    879    623    766      y
02   2590     99    413     57      A
03      6      3     11   2590      T
04    442     26   2590      2      G
05    107   2590    127    100      C
06     94      4   2590    478      G
07      0      0   2590      1      G
08      2      1   2590      0      G
09     30    491     15   2590      T
10   2590    492    915    568      a
Binding TFs: GCM1_DBD (GCM motif protein)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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