DNA Binding Motif
| Accessions: | 5z00_K (3D-footprint 20231221) |
| Names: | B3 domain-containing transcription repressor VAL1 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | AtVAL1 B3 domain in complex with 15bp-DNA |
| Length: | 5 |
| Consensus: | gCATg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13 16 54 13 g 02 0 96 0 0 C 03 96 0 0 0 A 04 0 0 0 96 T 05 13 13 57 13 g |
| Binding TFs: | 5z00_K (B3 DNA binding domain) |
| Binding Sites: | 5z00_I 5z00_J |
| Publications: | Wu B, Zhang M, Su S, Liu H, Gan J, Ma J. Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana. Biochem Biophys Res Commun 501:415-422 (2018). [Pubmed] |
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