DNA Binding Motif

						

			
Accessions: HOXB5_DBD (HumanTF 1.0)

			
Names: HOXB5
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 10
Consensus: rmymATTArd
Weblogo: 
PSSM: P0      A      C      G      T
01    318    170    235    167      r
02    225    230    220    214      m
03     68    324      8    566      y
04    589    300     24     98      m
05    889    139      0      0      A
06      0      0      0    889      T
07      0    216     13    889      T
08    889    239      0    179      A
09    329    148    230    182      r
10    232    198    232    228      d
Binding TFs: HOXB5_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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