DNA Binding Motif

						

			
Accessions: UN0253.1 (JASPAR 2024)

			
Names: Lyl1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 16
Consensus: rvACAGGAAGtggrkr
Weblogo: 
PSSM: P0      A      C      G      T
01   1593    927   1242    844      r
02   1429   1249   1266    662      v
03   3776    161    407    262      A
04    276   3634    550    146      C
05   4250    228     93     35      A
06     27     30   4514     35      G
07     54     34   4468     50      G
08   4502     49     25     30      A
09   4116     63     79    348      A
10    608    217   3709     72      G
11    367    823    402   3014      t
12   1146    612   2312    536      g
13    991    725   2173    717      g
14   1495    965   1163    983      r
15   1094    901   1317   1294      k
16   1220    955   1473    958      r
Binding TFs: P27792 (Helix-loop-helix DNA-binding domain)
Binding Sites: UN0253.1.1
UN0253.1.10
UN0253.1.11
UN0253.1.12 / UN0253.1.5
UN0253.1.13 / UN0253.1.6
UN0253.1.14 / UN0253.1.7
UN0253.1.15
UN0253.1.16 / UN0253.1.8
UN0253.1.17
UN0253.1.18 / UN0253.1.9
UN0253.1.10 / UN0253.1.19
UN0253.1.1 / UN0253.1.2
UN0253.1.20
UN0253.1.3
UN0253.1.2 / UN0253.1.4
UN0253.1.5
UN0253.1.6
UN0253.1.7
UN0253.1.3 / UN0253.1.8
UN0253.1.4 / UN0253.1.9
UN0253.1.11
UN0253.1.12
UN0253.1.13
UN0253.1.14
UN0253.1.15
UN0253.1.16
UN0253.1.17
UN0253.1.18
UN0253.1.19
UN0253.1.20
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.