DNA Binding Motif

Accessions: M0013 (AthalianaCistrome v4_May2016)
Names: CBF4.ampDAP, T24652;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 12
Consensus: ysATGTCGGyrr
Weblogo:
PSSM: P0 A C G T
01 128 173 68 230 y
02 86 155 209 149 s
03 546 2 16 35 A
04 4 23 15 557 T
05 0 0 599 0 G
06 0 0 0 599 T
07 0 599 0 0 C
08 0 0 599 0 G
09 3 0 596 0 G
10 0 309 0 290 y
11 327 75 163 34 r
12 277 73 161 88 r
Binding TFs: T24652 (AP2 domain)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.