DNA Binding Motif

						

			
Accessions: HOXA10_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gGTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   3452   3893   7096   2415      g
02   4321    420  16856      0      G
03     23    159      0  16856      T
04     25  16856      0      0      C
05    981      0  16856      0      G
06      2      0      0  16856      T
07  16856      6      2   1491      A
08  16856      0      0      0      A
09  16856     46      2     53      A
10  16856   2997   2007   4051      a
11   3494   5979   2401   4982      y
Binding TFs: HOXA10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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